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 | Acceso al texto completo restringido a Biblioteca INIA Las Brujas. Por información adicional contacte bibliolb@inia.org.uy. |
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Registro completo
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Biblioteca (s) : |
INIA Las Brujas. |
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Fecha : |
23/01/2023 |
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Actualizado : |
27/04/2023 |
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Tipo de producción científica : |
Artículos en Revistas Indexadas Internacionales |
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Autor : |
CASAUX, M.L.; NETO, W.S.; SCHILD, C.; COSTA, R.A. DA; MACÍAS-RIOSECO, M.; CAFFARENA, D.; SILVEIRA, C.S.; ARÁOZ, V.; DONCEL, B.; GIANNITTI, F.; FRAGA, M. |
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Afiliación : |
MARÍA LAURA CASAUX, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; WALDEMIR SANTIAGO NETO, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; CARLOS SCHILD, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; RICARDO ALMEIDA DA COSTA, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; MELISSA MACÍAS RIOSECO, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; California Animal Health and Food Safety (CAHFS) Laboratory, Tulare Branch, University of California at Davis, Tulare, CA, USA; RUBEN DARÍO CAFFARENA LEDESMA, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; Unidad Académica Salud de los Rumiantes, Facultad de Veterinaria, Universidad de la República, Montevideo, Uruguay; CAROLINE DA SILVA SILVEIRA, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; VIRGINIA ARÁOZ, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; BENJAMÍN DONCEL DÍAZ, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; Laboratorio de Patología Veterinaria Facultad de Medicina Veterinaria y de Zootecnia, Universidad Nacional de Colombia, Bogotá, Colombia; FEDERICO GIANNITTI, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; MARTIN FRAGA COTELO, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay. |
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Título : |
Epidemiological and clinicopathological findings in 15 fatal outbreaks of salmonellosis in dairy calves and virulence genes in the causative Salmonella enterica Typhimurium and Dublin strains. |
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Complemento del título : |
Veterinary Microbiology - Research Paper. |
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Fecha de publicación : |
2023 |
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Fuente / Imprenta : |
Brazilian Journal of Microbiology, 2023, volume 54, isuue 1, pp. 475-490. doi: https://doi.org/10.1007/s42770-022-00898-9 |
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ISSN : |
1517-8382 |
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DOI : |
10.1007/s42770-022-00898-9 |
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Idioma : |
Inglés |
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Notas : |
Article history: Received 06 December 2021; Accepted 20 December 2022; Published 05 January 2023. -- Correspondence author: Fraga, M.; Plataforma de Investigación en Salud Animal, Instituto Nacional de Investigación Agropecuaria (INIA), Estación Experimental La Estanzuela, Ruta 50, Km 11, El Semillero, Uruguay; email:mfraga@inia.org.uy -- Funding: This work was partially funded by INIA's grant PL-15, project FMV-104922 from the Uruguayan "Agencia Nacional de Investigación e Innovación" (ANII) and ANII (POS_NAC_2016_1_130296). -- Responsible Editor: Luiz Henrique Rosa. Supplementary information: https://static-content.springer.com/esm/art%3A10.1007%2Fs42770-022-00898-9/MediaObjects/42770_2022_898_MOESM1_ESM.xlsx |
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Contenido : |
ABSTRACT.- Salmonella enterica is a major food-borne pathogen that affects cattle-rearing systems worldwide. Little information is available on the epidemiology and pathology of salmonellosis and the virulence genes (VGs) carried by Salmonella in spontaneous outbreaks in cattle. We describe epidemiological findings in 15 fatal outbreaks of salmonellosis in Uruguayan dairy farms and the age, clinical signs, and pathology in 20 affected calves. We also describe the serotypes and frequencies of 17 VGs in the causative Salmonella strains and explore their associations with epidemiological, clinical, and pathological findings. Salmonella Typhimurium and Dublin were identified in 11/15 and 4/15 outbreaks, respectively. The most frequent reason for consultation was digestive disease (8 outbreaks caused by S. Typhimurium), followed by sudden death (4 outbreaks, 3 caused by S. Dublin). © 2023, The Author(s) under exclusive licence to Sociedade Brasileira de Microbiologia. |
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Palabras claves : |
Calves; Epidemiology; Pathology; PLATAFORMA DE INVESTIGACIÓN EN SALUD ANIMAL; Salmonella enterica; Uruguay; Virulence genes. |
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Asunto categoría : |
L10 Genética y mejoramiento animal |
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Marc : |
LEADER 02878naa a2200361 a 4500
001 1063946
005 2023-04-27
008 2023 bl uuuu u00u1 u #d
022 $a1517-8382
024 7 $a10.1007/s42770-022-00898-9$2DOI
100 1 $aCASAUX, M.L.
245 $aEpidemiological and clinicopathological findings in 15 fatal outbreaks of salmonellosis in dairy calves and virulence genes in the causative Salmonella enterica Typhimurium and Dublin strains.$h[electronic resource]
260 $c2023
500 $aArticle history: Received 06 December 2021; Accepted 20 December 2022; Published 05 January 2023. -- Correspondence author: Fraga, M.; Plataforma de Investigación en Salud Animal, Instituto Nacional de Investigación Agropecuaria (INIA), Estación Experimental La Estanzuela, Ruta 50, Km 11, El Semillero, Uruguay; email:mfraga@inia.org.uy -- Funding: This work was partially funded by INIA's grant PL-15, project FMV-104922 from the Uruguayan "Agencia Nacional de Investigación e Innovación" (ANII) and ANII (POS_NAC_2016_1_130296). -- Responsible Editor: Luiz Henrique Rosa. Supplementary information: https://static-content.springer.com/esm/art%3A10.1007%2Fs42770-022-00898-9/MediaObjects/42770_2022_898_MOESM1_ESM.xlsx
520 $aABSTRACT.- Salmonella enterica is a major food-borne pathogen that affects cattle-rearing systems worldwide. Little information is available on the epidemiology and pathology of salmonellosis and the virulence genes (VGs) carried by Salmonella in spontaneous outbreaks in cattle. We describe epidemiological findings in 15 fatal outbreaks of salmonellosis in Uruguayan dairy farms and the age, clinical signs, and pathology in 20 affected calves. We also describe the serotypes and frequencies of 17 VGs in the causative Salmonella strains and explore their associations with epidemiological, clinical, and pathological findings. Salmonella Typhimurium and Dublin were identified in 11/15 and 4/15 outbreaks, respectively. The most frequent reason for consultation was digestive disease (8 outbreaks caused by S. Typhimurium), followed by sudden death (4 outbreaks, 3 caused by S. Dublin). © 2023, The Author(s) under exclusive licence to Sociedade Brasileira de Microbiologia.
653 $aCalves
653 $aEpidemiology
653 $aPathology
653 $aPLATAFORMA DE INVESTIGACIÓN EN SALUD ANIMAL
653 $aSalmonella enterica
653 $aUruguay
653 $aVirulence genes
700 1 $aNETO, W.S.
700 1 $aSCHILD, C.
700 1 $aCOSTA, R.A. DA
700 1 $aMACÍAS-RIOSECO, M.
700 1 $aCAFFARENA, D.
700 1 $aSILVEIRA, C.S.
700 1 $aARÁOZ, V.
700 1 $aDONCEL, B.
700 1 $aGIANNITTI, F.
700 1 $aFRAGA, M.
773 $tBrazilian Journal of Microbiology, 2023, volume 54, isuue 1, pp. 475-490. doi: https://doi.org/10.1007/s42770-022-00898-9
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Registro completo
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Biblioteca (s) : |
INIA Las Brujas. |
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Fecha actual : |
27/04/2021 |
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Actualizado : |
10/08/2021 |
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Tipo de producción científica : |
Artículos en Revistas Indexadas Internacionales |
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Circulación / Nivel : |
Internacional - -- |
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Autor : |
QUERO, G.; SIMONDI, S.; CERETTA, S.; OTERO, A.; GARAYCOCHEA, S.; FERNANDEZ, S.; BORSANI, O.; BONNECARRERE, V. |
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Afiliación : |
GASTÓN QUERO CORRALLO, Dep. de Biología Vegetal, Facultad de Agronomía, Univ. de la República, Montevideo, Uruguay; SEBASTIÁN SIMONDI, Area de Matemática, Facultad de Ciencias Exactas y Naturales, Univ. Nacional de Cuyo (FCEN-UNCuyo), Mendoza, Argentina; SERGIO EDUARDO CERETTA SORIA, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; ALVARO RICARDO OTERO CAMA, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; SILVIA RAQUEL GARAYCOCHEA SOLSONA, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; SCHUBERT DANIEL FERNANDEZ REGGIARDO, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay; OMAR BORSANI, Dep. de Biología Vegetal, Facultad de Agronomía, Univ. de la República, Montevideo, Uruguay; MARIA VICTORIA BONNECARRERE MARTINEZ, INIA (Instituto Nacional de Investigación Agropecuaria), Uruguay. |
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Título : |
An integrative analysis of yield stability for a GWAS in a small soybean breeding population. |
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Fecha de publicación : |
2021 |
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Fuente / Imprenta : |
Crop Science, May 2021, volume 61, issue 3, pages 19003-1914. Doi: https://doi.org/10.1002/csc2.20490 |
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ISSN : |
0011-183X |
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DOI : |
10.1002/csc2.20490 |
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Idioma : |
Inglés |
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Notas : |
Article history: Received, 3 November 2020; Accepted, 11 February 2021; Published online, 14 April 2021.
Associate Editor: Junping Chen.
The authors thank Edgardo Rey and Wanda Iriarte for technical assistance in field experiment and laboratory works, respectively. They also thank Monika Kavanova for her contribution to data interpretation and discussion. This work was financially supported by the following projects: Innovagro FSA_1_2013_1_12924, funded by ANII (Agencia Nacional de Investigación e Innovación), and Red Nacional de Biotecnología Agrícola RTS_1_2014_1, funded by ANII, INIA (Instituto Nacional de Investigación Agropecuaria), Barraca Erro S.A., Lebu SRL, Fadisol SA, CALMER, and COPAGRAN.
Author Contributions: Gastón Quero: Conceptualization, Formal analysis, Investigation, Methodology, Writing‐original draft, Writing‐review & editing. Sebastián Simondi: Data curation, Formal analysis. Sergio Ceretta: Investigation, Methodology. Álvaro Otero: Methodology. Silvia Garaycochea: Methodology, Software. Schubert Fernández: Software. Omar Borsani: Supervision. Victoria Bonnecarrère: Conceptualization, Funding acquisition, Project administration, Supervision, Writing‐original draft, Writing‐review & editing.
Corresponding author: Victoria Bonnecarrère, Instituto Nacional de InvestigaciónAgropecuaria (INIA),Unidad de Biotecnología y Programa de Cultivo de Secano, Estación Experimental INIA Las Brujas,Ruta 48 km10, Canelones,Uruguay. Email: vbonnecarrere@inia.org.uy |
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Contenido : |
ABSTRACT.
Drought stress is one of the most important factors limiting soybean [Glycine max (L.) Merr.] productivity and reducing yield stability. Soybean breeders need phenotypic and genotypic tools to improve drought stress tolerance, but most of available strategies are expensive and unaffordable for small-scale public breeding programs. In this study, elite germplasm of a locally adapted breeding population was used to estimate a yield stability index as an indicator of drought response. In order to associate yield stability of analyzed genotypes to drought response, water deficit scenarios related to the crop cycle group were defined. Four groups of genotypes were identified in relation to yield stability: two groups showed stables yield (without interaction with water deficit scenarios), and two groups showed unstable yield (with crossover interaction with water deficit scenarios). This phenotypic information was used to identify genomic regions and candidate genes associated with yield stability index. A new method for the definition of a quantitative trait loci (QTL) region was developed based on the probability of marker pairwise of belonging to four linkage disequilibrium (LD) categories. Seven QTL were found and their implication on drought tolerance was further supported by linkage to previously reported QTL for water use efficiency trait. © 2021 The Authors. Crop Science © 2021 Crop Science Society of America |
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Palabras claves : |
Drought stress; GBS - Genotyping by sequencing; GWAS - Genome-wide association study. |
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Asunto categoría : |
F30 Genética vegetal y fitomejoramiento |
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Marc : |
LEADER 03833naa a2200277 a 4500
001 1061997
005 2021-08-10
008 2021 bl uuuu u00u1 u #d
022 $a0011-183X
024 7 $a10.1002/csc2.20490$2DOI
100 1 $aQUERO, G.
245 $aAn integrative analysis of yield stability for a GWAS in a small soybean breeding population.$h[electronic resource]
260 $c2021
500 $aArticle history: Received, 3 November 2020; Accepted, 11 February 2021; Published online, 14 April 2021. Associate Editor: Junping Chen. The authors thank Edgardo Rey and Wanda Iriarte for technical assistance in field experiment and laboratory works, respectively. They also thank Monika Kavanova for her contribution to data interpretation and discussion. This work was financially supported by the following projects: Innovagro FSA_1_2013_1_12924, funded by ANII (Agencia Nacional de Investigación e Innovación), and Red Nacional de Biotecnología Agrícola RTS_1_2014_1, funded by ANII, INIA (Instituto Nacional de Investigación Agropecuaria), Barraca Erro S.A., Lebu SRL, Fadisol SA, CALMER, and COPAGRAN. Author Contributions: Gastón Quero: Conceptualization, Formal analysis, Investigation, Methodology, Writing‐original draft, Writing‐review & editing. Sebastián Simondi: Data curation, Formal analysis. Sergio Ceretta: Investigation, Methodology. Álvaro Otero: Methodology. Silvia Garaycochea: Methodology, Software. Schubert Fernández: Software. Omar Borsani: Supervision. Victoria Bonnecarrère: Conceptualization, Funding acquisition, Project administration, Supervision, Writing‐original draft, Writing‐review & editing. Corresponding author: Victoria Bonnecarrère, Instituto Nacional de InvestigaciónAgropecuaria (INIA),Unidad de Biotecnología y Programa de Cultivo de Secano, Estación Experimental INIA Las Brujas,Ruta 48 km10, Canelones,Uruguay. Email: vbonnecarrere@inia.org.uy
520 $aABSTRACT. Drought stress is one of the most important factors limiting soybean [Glycine max (L.) Merr.] productivity and reducing yield stability. Soybean breeders need phenotypic and genotypic tools to improve drought stress tolerance, but most of available strategies are expensive and unaffordable for small-scale public breeding programs. In this study, elite germplasm of a locally adapted breeding population was used to estimate a yield stability index as an indicator of drought response. In order to associate yield stability of analyzed genotypes to drought response, water deficit scenarios related to the crop cycle group were defined. Four groups of genotypes were identified in relation to yield stability: two groups showed stables yield (without interaction with water deficit scenarios), and two groups showed unstable yield (with crossover interaction with water deficit scenarios). This phenotypic information was used to identify genomic regions and candidate genes associated with yield stability index. A new method for the definition of a quantitative trait loci (QTL) region was developed based on the probability of marker pairwise of belonging to four linkage disequilibrium (LD) categories. Seven QTL were found and their implication on drought tolerance was further supported by linkage to previously reported QTL for water use efficiency trait. © 2021 The Authors. Crop Science © 2021 Crop Science Society of America
653 $aDrought stress
653 $aGBS - Genotyping by sequencing
653 $aGWAS - Genome-wide association study
700 1 $aSIMONDI, S.
700 1 $aCERETTA, S.
700 1 $aOTERO, A.
700 1 $aGARAYCOCHEA, S.
700 1 $aFERNANDEZ, S.
700 1 $aBORSANI, O.
700 1 $aBONNECARRERE, V.
773 $tCrop Science, May 2021, volume 61, issue 3, pages 19003-1914. Doi: https://doi.org/10.1002/csc2.20490
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